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add dna assignment.
This commit is contained in:
Matthew Jensen
2019-12-13 14:01:10 -08:00
parent 9e458e8709
commit 7b04c359f4
16 changed files with 1157 additions and 8 deletions
Download Patch File Download Diff File Expand all files Collapse all files

18
dna/input/dna.txt Normal file
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@@ -0,0 +1,18 @@
cure for cancer protein
ATGCCACTATGGTAG
captain picard hair growth protein
ATgCCAACATGgATGCCcGATAtGGATTgA
bogus protein
CCATtAATgATCaCAGTt
michael jordan mad hops protein
ATgAGATCCgtgatGTGggaTCCTaCTCATTaa
paris hilton phony protein
AtgCCaacaTGGATGCCCTAAGATAtgGATTagtgA
george w bush approval rating protein
atgataattagttttaatatcagactgtaa
jimi hendrix guitar talent protein
ATGCAATTGCTCGATTAG
tyler durden's brain protein
ATGATAcctatgagtaaTGTGGACCatatccaaACTATAGGCATtgtcggACCAACGATcgattggtTATACTGA
mini me growth hormone
AtGgGaCGCTgA

40
dna/input/ecoli.txt Normal file
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thr operon leader peptide
ATGAAACGCATTAGCaCCAcCATtACCACCaCCATCaCcATTACCACAGGTAACGGTGCGGGCTGA
aspartokinase I/homoserine dehydrogenase I
ATGCGAGtGTTGAAGTTcgGCGGTaCATCAgTGGCAAATGCAGAACGTtTTCTGCGGgTTGCCGATAttCTGGAAAGcAATGCCAGGCAGGGGCAGgTGGcCACCGTCCTCtCTGcCCCCGCCAAAATCACCAACCATCtGGTaGCGATGATtGaaAAaACCATtAGCGGTCAGGAtGCtTTaCcCaATATCAGCGATGCCGAACGTATTTTTGCCGAACTtCTGACgGGACTCGCCGCcGCCCAGcCGGGATTTCCGCTGGCACAAtTgAAAAcTTTCGTCGACCAgGAATTTGCCCAAATAAAACATGTcCtGCATGGCatCAGTTTGTTGGGGCAGTGCCCGGaTAGCATcAACGCTGCGCTGATTTGcCGTGgCGAGAAAaTGTcGaTcgCCattaTGGCCGGCGTGTTAGAAGCGCGTGGTCACAACGTTACCGTTATCGATCCGgTCGAAaAAcTGCTgGCAGTGGGTCATTAcCtCgAaTCTACCGTTGATaTtGCTGAATCCACCCGCCGTATTGCGGCAAGCCGCATTCCgGCTGACCACATgGtGCTGATGGCTGGTTTCACTGcCggTAATGAAAAAGgCGaGCTGGtGGTtCTGGGAcGCAACGGTTCCGACTaCTCCGCTGCGGTgCTGGCGGCcTGTTTaCGCGCCGATTGTTGcGAgaTCTGGACGGATGTTGAcGGTGTTTATACCTGCGATCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCGATGTCCTATCAGgAaGCGATGGAGCTTTCTTACTTCGGCGCTAAAgTTCTTCaCCCcCGCACCATTACCCCCATcGCCCAGtTCCAGATcCCTtgCCtGATTAAAAATAcCGgAAAtCCCCAAGCACCAGgTACGCtCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGCATTTCCAATcTGAATaACATGGCAATgTTCAGcGTTTCCGgCCCGGGGAtGAAAGGgATggTTgGCATGGCGGCGCGcgTCTTTGCAGcGaTGTCACGCGCCCGTaTTtCCGTGGTgCtGATTACGCAATCATCTTCCGAATACAGTATCAGTTTCTGCGTTCCGCaAAGCGACTGTGTGCGAGCTgAaCGGGCAaTGcAGGAAGAGtTCTACCTGGAaCTGaAAGAAGGCTTACTGGAGCcGTTGGCgGtGACGGAACGGCTGGCCATTATCTcGGTGgTAGGTGATGGTATGCGcACCTtaCGTGGGAtCTCGgCGAAATtCTtTGCCGCGCTgGCcCGCGCCAATATCAACATTGTCgCCATTGCtCaGGGaTCTTcTGAaCGCTCAAtCTCTGTcGTGGTcAaTAACGATgATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGgCGTCGGTGGCGTTGgcGGTGCGCTGCTGgAGCAACTGAAGCGTCAgCAAAGCTGGTTGAAGAATAAaCATATCGaCTTACGTGTCTGCGGTGTTGCTAACTCGAAGgCACtgCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGgAAGAACTGGCGCAAGCcAAAGAGCCGTTTAATCTCGgGCGcTtAATTCGCCTCGTGAAAGAATATCATCTGCtGAaCCCGGTCATTgTTGACTgTACTTCCAgCCAGGCTGTgGCAGaTCAATATgCCGACTtCCTgCGCGAAGGTTTCCAcGTTGTtACGCCGAaCAAAaAGGCCaACACCTCGTcgATGGaTTACTaCCATCAGTtGCGTTATGCGGCGGAAAAATCGCGGCGTAaATTCCTCtATGACACcaACGTtGGGGCTGGATTACCGGTTATTgAGAACCTGCAAAATCTGCTCAATGCtGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCAGGTTCGCTTTCTTAtATCTTCGGCAAGTTAGACGAAGGCaTGAGTtTCTCCGAGgCGACCaCACTGGCGCGGGAAATGgGTTATACCGAACCGGAcCcGCGAGATGATCTTtCtGGTATGgAtGTGGCGCgTAagCTAtTGATtCTCGCTCGTGAAACGGGACGTGAACTGGAGCtGGCGGATATTGAAATTGAACCTgTGCTGCCCGCaGaGTTTAACGCCGAGGGTGATGTCGCcGCTTTTATGGCGAATCTGTCACAGCTCGACGaTCtCTTTGCCGCGCGTGTgGCGAAGGCCCGTGATGAAGGAAAAGTTTTGCGCTATGTTGGCAATAttGATGAAGATgGCgTCTGCCGCGTGAAGaTTGCCGAAGTGGATGgTAATGaTCCGCTGTTCAAAGTGAaAaATGGCGaAAACGCCCTGGCCTTCTATAGCCACTATtATCAGCCGCTGCCGTTGGTACTGCGCGGATATGGTGCGGGCaATgACGTTaCAGCTGCCGGTgTCTTTGCTGATCTGCTACGtACCCTcTCAtGGaAGTTAGGAGTCTGA
homoserine kinase
ATgGTTAAAgTTTAtGCCCCGGCtTCCAGTGCCaATATGaGcGTCGgGTTTGATGTGCTCGGGgCGGCGGTGACACCTGTTGATGGTGCATTGCTCGgAGaTGTagTcaCGGTTGAGGCGGCAGAGACaTTCAgTCTCAACAACCTCGGACGCTTTGCCGAtAAGCTGCCGTCAGAGCCACGgGaaAATAtCGTTtATcAGTGcTGGGAGCGTtTTTGcCaGGAGCTTGGCAAGCAAATTCCAGTGGCGATGaCTCTGGAAAAGAATatGCCGAtCgGTTCGGGcTTAGGCTcCAGCGCCtGTTCAGTGGTCGCGGCgCTgAtGGCGATgAATGAAcACTGCGGCaAGCCGCTTAATGACACTCGTTTGCTGGCTTtGATGGgCGAgTTGGAAGGGcGTATCTCCGGCAGCAtTCATTACGACAACGtGGCACCGTGtTtTCtTGGTGGTAtGCAGTtgATGATCGAAGAaAACGACATCATCAGCCAGCAaGTGCCAGGGTTTGATGAGtGGCTGTGGGTGCTGGCGTATcCGGgGAtTAAAGTCtCGaCGGcAGAAGCCAGGGCTaTTTTACCGGCGCAGTATCGCCGCCAGGATTGCATTGCGCAcGGGCgACATCTgGCAGGCTTCATTCACGCCTGCTATTCCCGTCAGCTTGAGCTTGCCGCGAAGCTGATgAAAGaTGTTATCGCTGAACCCTACcGTGaACgGTTaCTGCCAGGCTTCCGGCAGGCGCGGcAGgCGGTTGCGGAAATCGGCGCGGTAgCGAGCGGTATCTCCGGCTCCGGCCCGAcTtTGTTCGCTCTGTGtGAcAAGCCGGATACCGCCCAGCGCGTTGCCGACTGgTTGGGTAAGAACtAcCTGCAAAATCAGgAAGGTTTTGTTcATATTTGCCGGCTGGATACGGCGGGcGCACGAgTACTGGAAAACTAA
threonine synthase
ATGAAACTCtacaATCTGAAAGATCACAATGAGCAGgTCaGCTTTGCGCAAGCCGTAACCCAGgGgTTAGGCAAAAATCAGGGgCtGTtTTTTCcgCACgaCCTGCCGGaaTTCAGCcTgACTGAAaTTGATGAGATgCTGAAGCtGGATTTTGTCACcCGCAGTGCGAAGATCCTcTCgGCGTTTATTGGTGATGAAATCCCGCAGGAAaTCCTGGAAGAGCGCGTACGTGCGGCGTTTGCCTTCCCGGCTCCGGTCGCCAATGTTGAAaGCGATGTCGGTtGTCTGGAaTTGTTCcACGGGCcAACGCTGGCaTTTAAAGATTTCGGcGGTcGCTTTATGGCACAAATGCTgACCcATATTGCGGGCGATAAGCCAGTGAcCATTCTGACCGCGACATCCGGTgATACTGGaGCGGCAGTGGcTCATGcTTTCtACGGTtTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTgTTCTGTACATTGgGCggCAATATCGaAACTGTTGCCATCGAcggCGaTTTCGATGCCTGTCAGGCGCTGGTgAAGCAGGCgTTTGATGATGAAGAACTGAAAGTGgCgCtGGGGCtGAATTCTGCTAAcTCCATCAACaTCAGTCGCTTGCTGGCGcAGATTTGTTaTTAcTTTGaGGCTGTCGCACAGTtGCCGCAAGAAGCACGTAACCAGTTGgTTGTCTCGGTaCCGAGTGgAAACtTcGGCGATtTGACGGcGGGTCTGCTGGCGAaGTcACTCGGTCtGCCGGTAAAACGTtTTATTGCtgCGACCAACGTGAACGAtACCGTACCACGTTTCCTGCaCGaCGGTCAGTGGTCAcCCAAaGCGACTCAGgCGAcgTtaTCCAATGCGATGGATGTTAGCCAGCcAAaCAACTGGCCGCGTGTGGAAGAGTTGtTCcGCCGCAAAATCTGGCAACTGAAAGAGCTGGgTTATGCAGCCGTGgATGATGAAACCACGCAACAGACAATGcGTGAGtTAAaAGAACTGGGCTATACCTCGgAGCCGCACgCTGCCGTAGCTTATCGTGCGCTGCGTGACCAgTTGAAtCCAGGCGAATATGGCTTGTtCCTCGGcACcGCGCATCcGGcGAAatTtAAAgAGAGCGTGGAAGCGATTCTCGGTGAAAcGTTGGatCTGCCAAAAGAGCTGGCAGAACGTGCTgATTTACCCTTGCTTTCGCATAACCTGCCCGCCGATTTTGCTGCGTTGCGTAAatTgaTGATGAaTCATCAGTAA
hypothetical protein
AtGCAGCCcGGCTtTTTTTATGAAGAAAATaTGGAGaAaAACGACagGGAAAAAGGAGAAATTCtCAATAAATGCGGtAACTTAGAgATTaGGATTGCGGAGAATaACAACTGCcGTTCTCaTCGCGTAATCTCCGGATATCGACCCaTAACGGgCAATGATAAAAGgAGTAACCTGTGA
Non-protein region
aAAAACTgCTGGAAACAATGAAAGAcGTACCGGACGACCAAcGTCAGgCGC
transaldolase B
ATGACGGACAAATTGaCCTCcCTTCGTCAGTACACCACCGTAgTGGCCGACACTGGGGACATCGCGGCAATGAAGcTGTaTCAACcGCAGGATGCCACAACCAAcCCTtCTCTCATTCTTAACGCAGCGCAGATTCcGGAATACCGTAAgTTgATTGaTGATGCTGTCGCCTGGGcGAaACaGCAGAGCAAcGATcGCgCgCAGCAgATCGtGGACGCGACCGAcAAACTGGCAGTAaATATTgGTCTgGAAaTCCTGAAACTGgTTCCGgGCCgTATCTCAActGAAGTtGATGCGCGTCTTTCCTATGACaCCGAAGCGTCAATTGCGAAAGCAAAACGCCTGATCAAACTCTACAACGATGcAGGTaTTAGCAACGATCgTaTTCTGATCAAACTGGCTTCTACCTGGCAGGGTATCCGTGCTGcAGAACAGCTGGAAAAAGAaGGTATTAACTGTAAcCTGACCCTGCTgtTCTCctTCGCtCAGGcTCGTGCTTGTGCGGaAGCGGgCGTgTTCCTGaTCTCGcCGTTTgTTGGCcGTATTCTTGACTGGTAcAAaGCGAATACCGaTAAGAAAGAGtACGCTCcGGCAGAAGATcCGGGCGTGGTTTCTGTatCtGAAATCtACCAGtACTACaAAGAGCATGGTTaTgAAACCGTGGTTATGGGCGCAAGCTTCCGTAACATCGGCGAAATTCTGGAAcTGGCAGGCTGCGACCGTCTGACCatCGCACCGgcACTGCTGAAAGAGCTGgCGGAGAGCGAAGGGGCTATCgAACGTAAACTgTCTTACAcTGgTGAAGTgAAAGCgCGTCCGGcGCGTATCACtGAGtCCGAGTTCCTgTGgCAgCACAACCAGGATCCAATGGCAGTaGATAAACTgGcGGaAGgTATCCGTAAGTTTGCTGTTGACCAGGAAAAACTGGAAAAAATGATCGGCGATCTGCtGTAA
molybdopterin biosynthesis mog protein
ATGAATACTTTACGTATTGGCTTaGTtTcCaTCTCTGATCGCGCATCCAGCGGCGTTTAtCAGgaTAAAgGCATCCCTGCGCTGGAagAATGGCTGACAtcGGCGCTAACCACGcCGTTTGAaCTGGAAAcCCgCTTaATCCCCGATGAGCAGGCGATCATCGAGCAaACgTTgTGTGAGCTGGTGGATGAAaTGAGtTGCCaTCTGGTGCTCACCACGGGCGGAAcTGGCCCTGCGCGTCGTGAcgTAACGCcCGATGcGACGCTGGCAGTAGCGGACCGCGAGATgCcAGGCTTTGGTGAACAGATGCGCCAGATCAGCCTGCATTTTGTACcaaCTGCGATCCTTTCGCGTCAGGTggGGGTgATTCGCAAACAGGCGCTGATCCTTAACTTaCcCGGTCAACCGAAGtCTATTAAAGAGACGCtGgAAGGTGtGAAGGACGCTGAGgGTAAcGTTGTGGTGCACGgTATTTTTGCCaGCGTaCcGTaCTGCATTCAGTTGCTGGAAGGGCCATACGTTGAaACGGCaCCgGaAGTGGTTGCAGCATTCAGaCCGAAGAGTGCAaGACGCGAAGtTAGCGAATAA
chaperone protein DnaK
aTGGGTAAAATAaTTGGTATCGACcTGGGTACtACCAaCTCTTGTGTagCGaTTAtGGATGGCACCACTCCtCGTGtACTGgAGAACGcCGAAGGCGATCGCACCAcGcCTTcTATCATTgCCTATACCCAGGAtGGTGAAACTCTGGTTgGTCAGCCGGCTAAACGTCAGGCAgtGACGAACCCgCAaAACAcCCTGTtTGCGATTAAACGCCtGATTGGCCGCCgCTTCCAGgACgAAGAAGTACAGCGtGATgTTTcCATCATGCCGTTCAAAATTAtTGcTGCtgatAACGGCGACGcATGGGTCGAAGtTAAAgGCCAGAAAATGGCAcCGCCGcAGAtCTCTGCTGAAGTGCTGAAAAAAAtGAAGAAAACCGCTGAAGaTTAcCTGGgTGAAcCGGTAACTGaAGCTgtTATTACCGTACCGGCAtACTttaACGATGCTCAGCGTCAGGcAACCAAAGaCGCAGGCCGTATCGCTGGTCTGGAAGTAAAaCGTATCATCAACGAaCCGACCGCAGCTGCGCTGGCTtACGGtCTGGACAAAGgTACTGGCAACCgtACTATCGCGGTTTATGACCTGGGTGGTGGTACTTTCGATATTTcCATTATCGAaATCGACGAAGTTGACGGCgAAAAAACCttCGAAGTTCTGGCAACCAACGGTGATACCCACCTGgGTGGtgAAGACTTCGACAGTCGTCTGATCAACTAtCTGGTTGAaGAATTCAAgAAAGATCAGGGCATTGacCtGCGCAACGaTcCGCTGGCAATGCAGCGCCTGAAaGAAGCGGCAGAAAAAGCgAAAATCGAACTGTctTCCGCTCAGcAGACCGaCGTTAACcTGCCGTACATCACTGCAGACGCGAcCGGTCCGAAACACAtGAACATCaAAgTGactCGTGCGAAACTGGAAAGCCTgGtTGAAGAtCTGGTAAACCGtTcCATTGAGCCGCTGAAAGTTGCACTGCAGGACGCTGGCCTGTCCGTATCTGATAtCGACgaCGTTATTCTCGTTGGTGGTCAGACTCGTATGCcAATGGtTCAGAAGAAAGTTGCTGaATTCTTTGGTAAAgAGCcGCGTAAAGATGTTAACCCGGACGAAGCTGTaGCCATCGgTGCTGCTGTTCAGGGTGGTGTTCTGACTGGtGAcGTAAAAGaCGTacTGCTgCtGGACGTTACCCCGCTGTCtCTGGGTATcGaAACCaTGGGCGGTGTGATGACCACGCTGATCGCgAaAAACACCACTATCCCGACCAaGcAcaGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATcCATgtGCTGcAGGGTGAACgTAaACGTGCgGCTGAtAAcaAATCTCTgggTCAGTTcAACCTGGATGGTATCAaCCCGGCACCGcGCGGCAtgCCGcAGATCGAAGtTACCtTCGAtATCGaTGCTGACGGTATCCTGCaCGTTTCCGCGAAAGACAAAAACAGCGGTAAAGAGCAGAAGATCAcTATCAaGGCTTCTTCTGGtCTGAaCGAAGAtGAAATCCAGAAAATGGTACGCGaCGCAGAAGCTAAcGCCGAAGCTGACCGTAaGTTTGAAGAGCTGGTACAGACtcGCaACCAGGGCGACCATCTGCTGCACAgCACCCGTAAGCAgGTTGAAGAAGCAGGCGACAaACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGActGCACTgGAAACtGCTCTGAAaGGTGAAGaCAAAGcCgCTATcGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCaGCAGCAACATGCcCAGCAGCAGACTGCCGGTGCTgATgCTTCtGCAAaCAAcGCGAAAGaTGACGATGTTGTCGACGCtGAATTTGAAGAAGTCAAAGACAAAAAATAA
chaperone protein DnaJ
GTGCatTCatCTAGGGGcAATTTAAAAAAGATGGCTAAGCAAGATTaTTACGAGaTTTTAGGCGTTTCCAAAaCAGCGGAAGAGCGtGAaaTCAAAAaGGCCTACAAACGCCTGGCCATGAAaTACCaCCCGGaCcGTAACCAGGgTGACAAAGaGGCCGAGGCGAAATTTAAAGAGATCAAGGaAGCTTATGAAGTTCTGACCGACtCGCAAAAACgTGCgGCATaCGATCAGTaTGGTCATGCTGCGTTTGAGCAAGGTGGCATGGGCGGCGGcGGtTTTGGCGGCGGCgCAGACTTcAGCGATAtTTtTGGTGACGtTTTCGGCgATATTTTTGGcGGCGGACGTGGTCGTCAACGTGCGGCGCGCGGTGCTGATTTAcGCTATAACATGGAGctCACcCtCGAAgAAGCTGTACGtgGCGtGaCCAAAGaGATccGCATtCCGACTCtGGAAGAGTGTGACGTTTGCCACgGTAGCgGTGCAAAACCaGGTACACAgCCgCAGACCTGTCCGACcTgTcATGGTTCTGGCCAGGtGCAGATGcGCCAGGGTTTCTTTGcCGTGCAGCAGACCTgTCcAcACTGTCAGGGCCGCGGTACGCTGaTcAAAGATCCGTGCAACAAATGTCATGGTCATGGTCGTGtTGAGCgCaGCAAAACGCTGTCCGTTAAAATCCCGGCaGGGgTGGACACTGGAGaCCGCATCCGTCTTGCGgGCGAAGGTGAAGCGGGTGAACACGgCGCACCGGCAGGCGATCTgTACGTTCAGGTtCAGGTtAAACaGCACCCGATTTTCGAGCGTGAAGGCAACAACCTGTATTGcGAAGTcCCGATCAAcTTCGCTATGgCGGCGcTGGGTGGTgaAATCGAAGTACcGACCcTTGATGGTcGcGTCaaACTGAAAGTGCCTGGCGAAACCCAGACCGGTAAgCTGtTCCgTaTGCGCGGTAAAGGCGTCAAGTCtGTcCGCGGTGGcgCACAGGGTGATTtGCTATGCCGCGTTGTTGTCgaAACAcCGGTAGGTTTGAACgAGAAGCAGAAACAGCTGCTGCAAGaGctGCAAGAAAGCtTTGGTGGcCCAACCGGCGAGCACAACAGCCCGCGTTCAAAGAGCtTCTTtGATGGCGTGAaGAAGTTTTTTGACGaCCTgACTCGCTAA
hypothetical protein
TTGCTCTTaCTCGGATTCgTAAGCCGTGAAAACAGCAaCCTCCGtCTGGCCAGTTCGGATGTGAACCTCACAGAGgTCTTTTCTCGTTACCAgCGCCGCCACTACGGCGGTgATACAGATGACGATCAGgGcgACaAtcAtCgCcTTATGCTGCTTCATTGCTCtCTtCTCCTTGACCTTTCGGTCaGTAAGAgGCACTCTACATGTGTTCTGCATATAGgGGGCCTCGgGTtGATGgTAAAATAtCACTCGGGGCTTTTCTCTAtCTGCCGTTCAGCTAATgCcTGA
hypothetical protein
aTGTCTGCCAAaaGACGACTTCTTATTGCGtGTACCTTGAtAaCAGCTATcTATCAtTTTCCTGcaTATTCTTCATTAgAATATAAAGGAtCCTTTGGTTCAATaAATGCGGGTTAtGCAGACTGGAATAGTGGaTTTgTAAaCACTCACCGTGGTGAaGTATGGAAAGTGACtGCGGATTTTGGGgTaAATTTTAAAGAAGCAGAATTTTACTCAtTTTATgAaAGTAATGTACTCAATCATGCTGTAGCAGGGAGAAATCATACgGtTTCAGCAATGaCGCATGTCAGACTCtTTGaCtCTGATaTGACATTCTTTGGCAAAATTTaTGgCCAATGGGATAACTCATgGggTGAcGATCTgGACATGTTTTATGGATTCGGTTACCTCGGCTGGAACGGCgAgTGGgGCTTTTtTAAACCGTATATTGGATtGCATAATCAATCTGGTGACTACGTATCAGCTAAATaTgGTCAAACGAATgGTTgGAATGGtTATGTTGTTGGCTGGACAGCAgTATTAcCATTTAcGTTATTTGACGAAAAATTTGTTTTATCTAACTGGAATGaAATAGAACTGGACAGGaACGATGCTTACACGgAgCAGcAATTTGGCcGGAACGGgTTaAaTGGCGGtTTAACTATTGcCTGGAAGTTCTATCCTCGCTGGAAAGCCAGtGTGACGTGGCGTTATTTcGATAAtAaGCTGGGCTACGATGGCTTTgGcgaTCAAATGATTTAtATGCTTGgTTATGATTTCtAA
putative secreted sulfatase
ATGCAGAAAACGTTAATGGCCAGTTTGATCGGCCTTGCAGTTTGCACAGGGAAtGCTTTTAGtCCTGCCTTAGCCGCAGAGGCTaAACAACcTAATTTAGTCATtaTTATGGCGGaTGATtTAGGTtaTGGCGAtTTAGcAaCaTATGGTCATCAGATCGTTAAAACACctAATATCGACAGGCtTGCCCAgGAAGGGGTCaAATTtACTGAcTaCTATGCCCCCGCTCCTTtAaGTTCAccTtCACGCGCaGGGCTATTAACCGGCcGGATGCCATTtCGTAcTGGAATTCGCTCATGGATtCCttCAGGCAAAGATGTTGCCtTAGGGCGTAACGAAcTCACgATTGCTAaTCTACTCAaAgCGCAaGGGTACGACACggCAATGATGGGTAAGCTGCATCTGAATgCAGGcGGCGaTCGCACCGATCAgCCaCAAGCACaAgATATGGGcTTTGATTAcTCAcTGGTtAATACgGCGGGCTTTGTTACcGACGCCACGCTGGATAAcGCTAAAGAACGCCcGCGTTATGGCATGGTTtAccCGACAGGCtgGCtACGTAACGGGCAACCCACTcCACGaGCTGATAAAAtGAGCGGTGAGTATGTCaGTTCGGAAGTCGTCAACTGGCTGGATAACAAAaaGGACaGCAAGCCTTTCTTCCTCTATgTTGCTTTTACCGAAGTGCATAGCCCCCTGGCTTCGCCCAAAaaATACCTCGATaTGTaCTCACaATATATGAGCGCGTATCAGAAGCAGcATCCTGATTTAtTTTaTGGCGACTGGGcAgACAAACCCTgGCGTgGTGTGGGgGAATATTAtGCCAATATCAGCTATCtGGATGCAcAGGTTGGAAAAgTGCTGGaTAAAATCAAAGCTGTGGgtGaAGaaGaTAACACAATCGTTATTTTTACCAGTGatAACGGTCCgGTAaCGCGTGAAGCGCGCAAAGTGTATgAGCTGAATTTGGCAGGGGAaACGGaTGGATTACGCGGTCGCAAGGATAACCTTTGGGAAGGCGGAATTCGtGTTCCaGCCATTATTAAATaTGGTAAACATCTACCACAGGGAATGGTTTCAGATACACCCGTTTATGGtCTgGACTGGATGCCTACtTTaGCgAaAATGATGAACTTCAAATTACCTACAGAcCGTAcTTTCGATGgTGAATCGCTGGTTCCTGtTcTTGAGCaAAAAGCATTGAAACGCGAAAAGCCATTAATTTTCGGGATTGATATGCCATTCCAGGATgATCCAAcCGATGAATGGGCGATCCGTGATGgTGACTGGAAgAtGATTATCGATCGcaATAATAAACcGAAATATCTCTACAATCTGAAATCTGATCGTTATGAAaCaCTTaAtCTGATCGGTAAAAAAACAgATATTGAAAAACAGATGTATGGTaAGtTTtTAAAATATAAAACTGATATTGATaATGATtCTCTAATGAAAgCCAGAGGTGATAAACCAGAAGCGGTGACCTggGGCTAa
putative cytoplasmic protein
ATGTTTACcAacGTAAATGTTGATTGtTgCAAAACACCAGGAtGTAAaaACCTGGGGTTGCTGAATAGCCAGGATTATGTCGCAcAGgGTaAaAATATTTtATGCCGTGAATGTgGTTaCTTGTtTCCAGtGATATCTGAACAGTCGCTTAAtATTTaTCGTAATATTGTGAAtcACTcCTGGAGAGGTTTGATTTGCCAATGTTCAACTtGCGGAGGcACGTCCCTCAAAAAATaTGgATATtCtGCAcAagGCCAgAGAAGAATgTATTGCcaTCAtTGTGaGAAAACaTTtATCACTCTGGAAcAtGTAATTACcACACCACGAGGAGCcCTGTTAGcATTGATGATTGAGCAAGGGGAGGCACTTGCGGaTATCAgAAAGTCATTACGTCTTAACAgCACTGGACTTAGCCGTGAACTGTTAAAATTAGCGCGTGAAGcAAACTATAAAGAAAGTCGACAGTGTTTCCCTGCTTCTGATATTACCCTGAGtACCCGCGCTTtTCGcgTCAAGTAtAATGGTAGCAATAACTCTCTTTATGCTCTTGTTACCGCAGAAGAACAAAGcGGCAGGGTgGTTGcCaTCTCAACCAATTACTCCCCATCtGCCGTAGagCaaCATTATcAATACaCATCGAACtATGAAGAGcGTATGTCTCCAGGGACGCTGGCACAtCATGTCCAGCGCAAAGAGttACTTACTATGCGGCgGGATACCTTGTTTGATATTGATTACGGCcCGgCAGTTTTACATCAAAACGATCCGGGAATGtTGGTAaAaCCGGTTCTTCCGGCATaTCGTCATTTTgAACTGGTCAGAATACTGACCGATGAGCATtCCAACAACGTTCAGCATTACCTTGATCACGAATGCTTTATaTTGGGCGGCTGcCTGATGGCTAATTTGCAGCaTATTCATCAaGGTCGCTGCCATATTTCcTTTGTCAAaGAGCGcGGTGTGGCACCCGCCACCATTGaTTTTCCACCGCGATtATTCcTTAGTgGtGGgGTACgAAATAATGTCTGGCGTGCaTTTTCTAACCGCAATTATTCAaTGGCTGTATGCAAtCTCaCTGGCAGTAAGAAAGTCCGCGAGATGCGGCATGCAACATtGAACAGTGCGACGCgTTtTATCCACTTTGTGgaGAACCATCCTTTCCTTATaTCATTGAACCGAATgtCTCCTGCGaaTGTCgtTTCTACaTTAGATaTCCTCAAACaTCTGTGGAATAaAaAACTAGagCATGGAACAATTtAA
sodium/proton antiporter 1
GTGAAACATCTGcATCGATTCTTTAGCaGTGATGCCTCGGGAGgCATTATTCTCATTATTGCCGCTGTATTAGCGATGATTATGGCCAACAGCGGTgcAaCCAGTGGATGGTATCACGACTTTCTTGAGACGCcGGTTCAGcTcCGGGTTGGGACACTTGAGATCAACAAGAACATGCTGCTATGGATCAATGaCGCTCTGaTgGCGGTATTTTTCCTGTtGGTTGGTcTGGaAGTTAAAcGCGAGcTGaTGCAaGGTTCGCTGGCCAGTCtGCgCCAGGCGGCatTTCCTGTTATTGCCGcAATCGGCGGGATGATTGTCCCGGCATTGCTCTATCTGGCTtTtAACTATGCCGATCCGaTTaCCCGCGAAGGcTGGGCAatCCCGGCGGCGACTGacATTGCCTTTGCACTTggTgTGTTGGCGCTgTTGGGAAGTCGTGTTCCGTTAGCGCtGAAGATCTTTTtGATGGCTCTGGCtATTATCGACGATCTTgGGGcCATCATtATCATCGCATTGTTCTACAcTAATGACTTATCGATGGCCTcTCTTGGCGTcGCgGCTGTAGCAATTGCGgtACTCGCGGTATTGAAtCTGTgTGGTGTAcGCCGCACGGGCGTtTATATTCTGGTTGGCGTGGTGCtGTGGaCAGCGGTGTTGAAATCGGGGGTTCACGCAACCcTGGCTGGCGtCATtGtCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGgCGCTCTCcGgCTAAACGTCTGGAGCATGTTTTGCAtCCATGGGTGGCGTATCTGATtTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAaGGTgTCACGCtggAaGGTTTgACCtCCATTCTGCCATTAGgGATCATCGCTGGTTTGCTGaTTGGCaAGCCACtGGGTAtTaGTCTgttcTGCTGGtTGGcgCTGCGTTTGAAATTGGCACATCTGCCAGAGGGAACgACTtACCAGCAAATTATGGCGGtTGGTaTCcTGTGCGgTATCgGTTtTAcTatGTCTATCTTTATTGCCAGCCTGGcATTTGGTAgCGTAGATcCAGAaCTGaTTAACtGGGCAAAAtTAgGTATCCTTGTCGGTTCAATTTCtTcGgCGGTAATTGGATATAGcTGGTTACGcGTTCGTTTACGTCcATcAGTTTGA
transcriptional activator protein NhaR
ATGAGCATGTCTCATaTCAATTACAACCACTtGTATTACTTCTGGCaTGTCTAcAAAgAaGGTTCTGtGGTTGGCgCAGCGGAGGCGCTTTATTTAACAcCAcAAACCATTACCGGGCaGATCCGGGCGCTGGAaGAGCGCCTGCAAGGGAAAcTATTTAAGCGTAAAGGAcgTGGTCTGGAACCCAgcGAACTGGGGGAACTGGTCTATCGCtATGCCGATAAAATGTTCAcCTTAAgCCAGGAAATGCTgGATATCGTCAACTATCGCAAAGAGTCCAACTtATTGtTTGATGTTgGTGTGGCAGATGCACTTtcCAAAcGtcTGGTCAGCAGTGTTCtgGATgCCGCAGTtgTGGAAGACGAGCAGAtCCATCTACGCTGTTTCGAaTCGACGCACGAGATgCTTTTaGAGCAgtTGAGTCAGCATAaACTGGATATGATcaTCTCTGACTGTCCGaTCGATTCCACTCAGCAGGAAGGGCTGTTTTCCATGAAAaTtGGCGAATGTGGTGTCAgtTTCTGGTgCACTAACCCACTACcAGAAAAGCCGTTTCCTGCCtGTCTTGAAgAGCgTCGtTtACTTATTCCGGGGCGTCGCTCAaTgTTGGGGCGtAAACTATTAAACTGGTTTAACTCcCAGGGCTTGAACGTCGAAATTTTGgGTGAGTTTGATGATGCTGCGTTGATGAAAgCCTTTGGGGCGAcGCATAACGcTATTTTCGTTGCACCTTCGCtTTACGCTAATgATTTCTATAACgATGACTCGgTtGTGgAGATAGgCCGTGTTGAGaACGTGATGGAAGAGTACCACGCGATTTtTGCCGaAAGgaTGAtTCAgCACCCTGcAGTAcAGCGTATCTGcAATACAgacTATTCTGCGCtgTTTACTCCAGCTTcAAAATAA
riboflavin kinase
ATGAAGCTGATACGCGgCAtACATAATCTCAGCCAGGCCCCGCAAGAAGGGTGTGTGCTGACTATTGGTaATTTCGACGGCGTGCATCGCggTCATCGCGCGCTGTTACAGGGCtTGCAGGAAGAAGGGCGCAAGCGCAACtTACCGGTGATGGTGATGCTTTTtGaACCTCAACCAcTGGAACTGTTTGCTACTGAtAAAGCcCCGGCACGGcTcACcCGGCTGCgGGAAAAACTGCgTtaTcTTgCAGAgTGTGGCGTTGATTACGTGCTGTGCGtGCGTtTTGaCaGGCGTtTTGCGGCGTTAACCGCGcAAAACTTCATCAgTGATCTtCTGGTGAAGCACTTGCGGGTAAAATTTCTTGCCGTAGGTGACGAtTTCCGCTTTggCGCTGgTCGTGAAgGCGAtTTCTtGTTATTACAGAaAGcgGGCATGGAATACGGCTTCGATATcACCAGCaCGCAAAcTTtTTGCGAAGGTGGTGTGCGtATCAGcAGCACCGCCGtgCGTCAGGCGCtTGCGgATgACAATCTGGCTCTGGCAGAAAGTTTACTGGgGCACCCGTTTGCTATCTCCGGGCGTGTAGTCCACGGTGATGaATTAGGGCGCAcTATAGGTTTCCCgACGGCGaATGTACCGcTaCgCCGTCAGGTTTCCCCGGTGAAAgGGGTTTATGCGGTAGaAgTgTTGGgCCtTGgCGAAaAGcCGTTAcCCGGcgTTGCAAACaTCGGAACACgCCCAACGGTTGCcGGTATTCGCCAGCAACTGgaAGTGCATTTGTTAGATGTTGcAATGGaCCTTTATGGTCGCCAtATACAAGTAGTGCTGCGtAAAAaAATAcGCAATGAGCAgCGATTTGcATCGCTGGACGAACTGAAAGCGCAGATTGCGCGTGATGAATTAACCGcCCGCGaaTTTtTTGGGCTAAcAAAACCGGCTTAa
Isoleucyl-tRNA synthetase
ATGAGTGACTATAAATCaACCCTgAATTTGCCgGAAACAGgGTtCCCGATgCGTGGCGATCTCGcCAAGCGCGAAcCGGGaATGCTGGCGCGTTGGACTGATGATGATCTgTaCGGCATCATCCGTGCGGCTaAAAAAGGCAaAaAAACCTTCAtTCTGCATgATGGCCcTCCTTATGCGAATGGCAGCAtTCaTATTGGTcACTCGGTTAACAAGATTCTGAAAGACATTaTCATTaAgTCCAAAgGGCTttCTGGATATGACTCGCCGTATGTGCCTGGCTGGGACTGTCaTGGtCTGCCAATCGAAcTGAAAGTAGAGCAAGAATACGGTAAGCCGGGgGAGaAaTTCACCGCCGcTGAGTtCCGCGCCAAGTGCCGCGAATACGCTGCgACCCAGGTTGACGGTCAGCGCAAAGACTTTaTCcGTCTGGGCGTGCTGGGCGActgGTCgcACCCGTACCTGACCATGGACtTCAAAACTGAAGCCAACATCATCCgCGCGCTGGGCAAAATCATCGGCAAcGGTCACCTGCACaAAGGcGCGAAGCCGGTgCACTGGTGCgTTGACTGCCGTTCTgCACTGGCAGAAGCGGAAGtTgAGTATTACGacAAAACTtCTCCGTCCATCGACGTCGCTTtCCAGGCGGTCGATCaGGATGCGCTGAAAACGAAATTTGGCGTAAGCAATgTTAACGGCCCAATTTCGCtGGTTATCTGGaCcACCACGcCGTGgAcGCTGCcTGCTAacCGCgCAATCTCcATtGCACCTGATTTTGAttATGCGCTGGTGCaAatCgACGGTCAGgCCGTGATCCTCGCGAAAGATCtGGtTGaAAGCGTAAtGCAGCGTATCGGCGTTAGCGaTTACACCATTCTTGGCAcGGtgAAAGGTGCCGAGCtGGAACTGTTgCGCTTTACCCATCCGTTtATGGACtTCGATGTTCCGGCAaTTCTCGGCGACcACGTTACgCTGGATGCCGGTACCGGTGcCGTTCATACCGCGCCAGGCcACGGTCCGGaCGACTATgTGATCGGTcAAAAATaTGgTCTGGAAaCCGCTAACCCgGTTgGCcCGGACGgCACtTaTCTGCcGgGTACTTACCCGACTCtGGATgGCGTTaACGTCTTCAAAGCGAACGaTATTGTCATTGCGTTGTTgCAGGAAAAAGGcgCACTGTTGCACGTTGAGAAAATGCAACACAGCTATCCGTgCTGCtGGCGTCaTAAaACGCCGATCAtCTTCCGcgCGACGCCGCAGTGGTTCGTCAgCAtgGATCAGAAAGGTCTGCgTGCGcAGTCACTGAAAGAGATCAAAGGCgTGCAGTGGATCCCTGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATcTCTCGTCaGCGTACCTGGGGcGTGCCgATGTCACTGTTCGTgCaCAaaGACACAGAAGAaCTGcATCCGCgTACTCtcGAACTGaTGGAAGAAGTGGcAAAACGCGTTgAAGTtGACgGCATTCAGGCgTGGTGGGATCTCGATGCGAAaGAgATCcTCGGCGaCGAAGCTGACCAGTATGTGAAAGTACCGGATACGCtGgATGTATGGTtTGACTCCGGATCTACCCACTCTTCCGTTGTTGATGTGCGTcCGGAATtTGCCGGTCACGCAGCGGACATGTaTcTGgAaGGTTCTGACCAACACcGTGgCTGGTtCATGTCtTCCCTGATGATCTCTACCGCGATGAAGGGcAAAGcGCCATATCGTCAGGTACTGACTCACGGCTTTAcCGTGGATGGTCAGGGTCGCAAGATGTCTAAATCCATCGGtAACaCcGTTTCGCCGCAGGATGTgATGAATAAACtGGGtGCGGATATTCTGCGTCTGTGGGTGGcATCAACCGACTAcACTGGCGAAATGGCcGtTTCTGACGAGATCcTGAAACGtGCTGCcGACAGCTATCGTCGTATCcGTAACAcCgCGCGCTTCCTGCTGGCAAACCTGAACgGTTtTGAtCCGGCaAAAGaTATGGTGAAACCGGAAGAGATGGTGGTaCTGGATCGCTGGGCCGtAGGTTGTGCGAAAGCGGCACAGGAAGACATCCtCAAGGCgTACGAAGCATACGATTTCcACGAAGTGGTaCAGCGTcTGaTGCGCtTCTGCTCCGTTGAGATGgGTTccTTCTACCTCGACATCATCAAAGACCGTCAgTATACcGCCAAAGCGGaCAGCGTGGCGCGTCGTAGCTGCCAGAcTgCGCTGTATCACATCGCaGAAGCGCTGGTTCGCTGGATGGCAcCAATCCTCTCCTTCaCcGCTGaTGAAGTGTGGGGtTaCCTGCCggGCGAACGTGAAAAATACGTCTTCAcCGGCgAgTGgTACGAAGGCCTGtTTGGTCTGGCAGACAGTGAAGCAATGAACGaTGCGTTCTGGGACGAGCTGTTGAAAGTGcGTGGCGAAGTGAAcAAAGTcaTTGAGCAAGCgCGTGCCGATAAGAACGTGGGcGGCTCGCTGGAAGCGGCAGTAAcCTTGTATGCAGAACCGGAaCTGGCgGCGAaaCTGaCCGcGCTGGGCGAtGAATTACGATTTGTCCTGtTGACCTCCGgCGCTAcCGTTGcAGACtATAACGACGCACCTGCTGATGCCCAGCAGaGCGAaGTcCTCAAAGGGCTGAAAgtCGCGTTGAGTAAAGCCgAAGGtGaGAAGTGTCCtcGctGCTGgCACTACACCcAGgATGTcGgCAAGGTGGCGGaACACGCAGAAATCTGCGGCCGCTGTgTcAgCaACGTCGCCGGTGACGGTGAAAAaCGTAAGTTTGCCTGA
Non-protein region
GCTTGCGCCAACGcCATTTCATCGCCATCCCGCCgAgcATACAGGCCTCGgAaGAACCAaTGGTGTTGGTGcCAACGGCCtGAccATTTTTcGGTGCAGGCGCATGCCACAGATCGGCAACCATGTTTACGCAACGCAGATCGATTGCTGcAGaTTGCGGATATTctTCTTTGTCGATCCAGTTTTTGTtAATGGAtAAAtCCA
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase
ATGTCTGAATCTGTACAGaGCAaTAgCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGAtGGCaCCAcCGCTGAGTCTACCCGCAaCAaCGGTAaACCGGCGCTGTTCCGCcTGgGTgATGCTTCTCTTTCTgAaGgGCTGGAGCAACACCTGCTgGGGCTGAAAGTGGgCGATAAAACCaCCTTCtCGCTGGAGCCAGATGCGGCgTTtgGCGTGCCGTcACCgGAcCTGATtCAGTAcTTCTCcCGCCGTGAATTTATGgATGCAGGCGAGCcaGAAATTGGCGCAATCATgCTTTTTACCGCAATGGaTGGCAGTGAGATGCCTGGCGTGaTCCGCgAAATTAACGGCGACTCCATTACCGTTGATTTCAACCaTCCGCTgGCCGGGCAGACCGTTCATTTTGATATTGaagTGCTGGaAATCGATCCGGCAcTGGAGGcGTaA